Here is a list of all documented class members with links to the class documentation for each member:

- a -

• aaMapping : BaseDiversity
• ABC() : ABC
• actualSiteIndex : Mutation
• add_fname() : ABC
• addChange() : ParamSet
• addPopulation() : Controller , Current , ParamSet
• addTime() : Arg
• ageMRCA() : Arg
• ageUltimateMRCA() : Arg
• Align() : Align
• align() : Convert
• allele() : HFStatistics , SitePolymorphism
• alleleFrequency() : SitePolymorphism
• alleleFrequencyPerPopulation() : FStatistics , HFStatistics
• alleleFrequencyTotal() : FStatistics , HFStatistics
• alleleValue() : FStatistics , HFStatistics
• ambiguousPositions() : Consensus
• append() : Align , Container
• appendSequence() : Align , Container
• apply() : AllMigrationRateChange , AllPopulationSizeChange , Bottleneck , Change , GrowthRateChange , PopulationBottleneck , PopulationFusion , PopulationGrowthRateChange , PopulationSplit , SelfingRateChange , SingleMigrationRateChange , SinglePopulationSizeChange
• Arg() : Arg
• atLeastPartiallyResolvedAmbiguities() : Consensus
• average_Pi() : NucleotideDiversity