Egglib 2.1.11
C++ library reference manual
BppDiversity Member List

This is the complete list of members for BppDiversity, including all inherited members.

b_coding (defined in BppDiversity)BppDiversityprotected
b_loaded (defined in BppDiversity)BppDiversityprotected
b_outgroup (defined in BppDiversity)BppDiversityprotected
BppDiversity()BppDiversity
computeDouble(bpp::AlignedSequenceContainer &ingroup, bpp::AlignedSequenceContainer &outgroup) (defined in BppDiversity)BppDiversityprotected
computeSingle(bpp::AlignedSequenceContainer &align) (defined in BppDiversity)BppDiversityprotected
D() const BppDiversity
Deta() const BppDiversity
Dfl() const BppDiversity
Dflstar() const BppDiversity
dna (defined in BppDiversity)BppDiversityprotected
eta() const BppDiversity
F() const BppDiversity
Fstar() const BppDiversity
H() const BppDiversity
hasOutgroup() const BppDiversity
He() const BppDiversity
He2() const BppDiversity
K() const BppDiversity
load(Align &align, unsigned int dataType=1)BppDiversity
MK() const BppDiversity
ncodon1mut() const BppDiversity
NI() const BppDiversity
NSsites() const BppDiversity
nstop() const BppDiversity
nsyn() const BppDiversity
p_code (defined in BppDiversity)BppDiversityprotected
p_code4 (defined in BppDiversity)BppDiversityprotected
p_code5 (defined in BppDiversity)BppDiversityprotected
p_code6 (defined in BppDiversity)BppDiversityprotected
p_code7 (defined in BppDiversity)BppDiversityprotected
PiNS() const BppDiversity
PiS() const BppDiversity
reset() (defined in BppDiversity)BppDiversityprotected
rhoH() const BppDiversity
S() const BppDiversity
Sext() const BppDiversity
Sinf() const BppDiversity
SNS() const BppDiversity
SS() const BppDiversity
Ssin() const BppDiversity
Ssites() const BppDiversity
T83() const BppDiversity
Ti() const BppDiversity
TiTv() const BppDiversity
Tv() const BppDiversity
tW() const BppDiversity
tWNS() const BppDiversity
tWS() const BppDiversity
v_D (defined in BppDiversity)BppDiversityprotected
v_Deta (defined in BppDiversity)BppDiversityprotected
v_Dfl (defined in BppDiversity)BppDiversityprotected
v_Dflstar (defined in BppDiversity)BppDiversityprotected
v_eta (defined in BppDiversity)BppDiversityprotected
v_F (defined in BppDiversity)BppDiversityprotected
v_Fstar (defined in BppDiversity)BppDiversityprotected
v_H (defined in BppDiversity)BppDiversityprotected
v_He (defined in BppDiversity)BppDiversityprotected
v_He2 (defined in BppDiversity)BppDiversityprotected
v_K (defined in BppDiversity)BppDiversityprotected
v_MK (defined in BppDiversity)BppDiversityprotected
v_ncodon1mut (defined in BppDiversity)BppDiversityprotected
v_NI (defined in BppDiversity)BppDiversityprotected
v_NSsites (defined in BppDiversity)BppDiversityprotected
v_nstop (defined in BppDiversity)BppDiversityprotected
v_nsyn (defined in BppDiversity)BppDiversityprotected
v_PiNS (defined in BppDiversity)BppDiversityprotected
v_PiS (defined in BppDiversity)BppDiversityprotected
v_rhoH (defined in BppDiversity)BppDiversityprotected
v_Sext (defined in BppDiversity)BppDiversityprotected
v_Sinf (defined in BppDiversity)BppDiversityprotected
v_SNS (defined in BppDiversity)BppDiversityprotected
v_SS (defined in BppDiversity)BppDiversityprotected
v_Ss (defined in BppDiversity)BppDiversityprotected
v_Ssin (defined in BppDiversity)BppDiversityprotected
v_Ssites (defined in BppDiversity)BppDiversityprotected
v_T83 (defined in BppDiversity)BppDiversityprotected
v_Ti (defined in BppDiversity)BppDiversityprotected
v_TiTv (defined in BppDiversity)BppDiversityprotected
v_Tv (defined in BppDiversity)BppDiversityprotected
v_tW (defined in BppDiversity)BppDiversityprotected
v_tWNS (defined in BppDiversity)BppDiversityprotected
v_tWS (defined in BppDiversity)BppDiversityprotected
~BppDiversity()BppDiversityvirtual

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